Index

_

__repr__() (InspectorMessage method) _auto_parse() (in module nwbinspector._registration) _check_subject_sex_c_elegans() (in module nwbinspector.checks._nwbfile_metadata)

_check_subject_sex_defaults() (in module nwbinspector.checks._nwbfile_metadata) _intercept_in_vitro_protein() (in module nwbinspector._nwb_inspection) _parse_location() (in module nwbinspector._registration) _pickle_inspect_nwb() (in module nwbinspector._nwb_inspection)

C

check_ascending_spike_times() (in module nwbinspector.checks._ecephys) check_col_not_nan() (in module nwbinspector.checks._tables) check_column_binary_capability() (in module nwbinspector.checks._tables) check_compass_direction_unit() (in module nwbinspector.checks._behavior) check_data_orientation() (in module nwbinspector.checks._time_series) check_description() (in module nwbinspector.checks._general) check_doi_publications() (in module nwbinspector.checks._nwbfile_metadata) check_dynamic_table_region_data_validity() (in module nwbinspector.checks._tables) check_electrical_series_dims() (in module nwbinspector.checks._ecephys) check_electrical_series_reference_electrodes_table() (in module nwbinspector.checks._ecephys) check_electrical_series_unscaled_data() (in module nwbinspector.checks._ecephys) check_electrodes_location_allen_ccf() (in module nwbinspector.checks._ecephys) check_emission_lambda_in_nm() (in module nwbinspector.checks._ophys) check_empty_string_for_optional_attribute() (in module nwbinspector.checks._nwb_containers) check_empty_table() (in module nwbinspector.checks._tables) check_excitation_lambda_in_nm() (in module nwbinspector.checks._ophys) check_experiment_description() (in module nwbinspector.checks._nwbfile_metadata) check_experimenter_exists() (in module nwbinspector.checks._nwbfile_metadata) check_experimenter_form() (in module nwbinspector.checks._nwbfile_metadata) check_file_extension() (in module nwbinspector.checks._nwbfile_metadata) check_ids_unique() (in module nwbinspector.checks._tables) check_image_series_data_size() (in module nwbinspector.checks._image_series) check_image_series_external_file_relative() (in module nwbinspector.checks._image_series) check_image_series_external_file_valid() (in module nwbinspector.checks._image_series) check_image_series_starting_frame_without_external_file() (in module nwbinspector.checks._image_series) check_imaging_plane_location_allen_ccf() (in module nwbinspector.checks._ophys) check_institution() (in module nwbinspector.checks._nwbfile_metadata) check_intracellular_electrode_cell_id_exists() (in module nwbinspector.checks._icephys) check_intracellular_electrode_location_allen_ccf() (in module nwbinspector.checks._icephys) check_keywords() (in module nwbinspector.checks._nwbfile_metadata) check_large_dataset_compression() (in module nwbinspector.checks._nwb_containers) check_missing_unit() (in module nwbinspector.checks._time_series) check_name_colons() (in module nwbinspector.checks._general) check_name_slashes() (in module nwbinspector.checks._general) check_negative_spike_times() (in module nwbinspector.checks._ecephys) check_optogenetic_stimulus_site_has_optogenetic_series() (in module nwbinspector.checks._ogen) check_order_of_images_len() (in module nwbinspector.checks._images) check_order_of_images_unique() (in module nwbinspector.checks._images) check_plane_segmentation_image_mask_shape_against_ref_images() (in module nwbinspector.checks._ophys) check_processing_module_name() (in module nwbinspector.checks._nwbfile_metadata) check_publication_list_format() (in module nwbinspector.checks._nwbfile_metadata) check_rate_not_below_threshold() (in module nwbinspector.checks._time_series)

check_regular_timestamps() (in module nwbinspector.checks._time_series) check_resolution() (in module nwbinspector.checks._time_series) check_roi_response_series_dims() (in module nwbinspector.checks._ophys) check_roi_response_series_link_to_plane_segmentation() (in module nwbinspector.checks._ophys) check_session_id_no_slashes() (in module nwbinspector.checks._nwbfile_metadata) check_session_start_time_future_date() (in module nwbinspector.checks._nwbfile_metadata) check_session_start_time_old_date() (in module nwbinspector.checks._nwbfile_metadata) check_single_row() (in module nwbinspector.checks._tables) check_small_dataset_compression() (in module nwbinspector.checks._nwb_containers) check_spatial_series_degrees_magnitude() (in module nwbinspector.checks._behavior) check_spatial_series_dims() (in module nwbinspector.checks._behavior) check_spatial_series_radians_magnitude() (in module nwbinspector.checks._behavior) check_spatial_series_unit() (in module nwbinspector.checks._behavior) check_spike_times_not_in_samples() (in module nwbinspector.checks._ecephys) check_spike_times_not_in_unobserved_interval() (in module nwbinspector.checks._ecephys) check_spike_times_without_nans() (in module nwbinspector.checks._ecephys) check_subject_age() (in module nwbinspector.checks._nwbfile_metadata) check_subject_age_reference() (in module nwbinspector.checks._nwbfile_metadata) check_subject_exists() (in module nwbinspector.checks._nwbfile_metadata) check_subject_id_exists() (in module nwbinspector.checks._nwbfile_metadata) check_subject_id_no_slashes() (in module nwbinspector.checks._nwbfile_metadata) check_subject_proper_age_range() (in module nwbinspector.checks._nwbfile_metadata) check_subject_sex() (in module nwbinspector.checks._nwbfile_metadata) check_subject_species_exists() (in module nwbinspector.checks._nwbfile_metadata) check_subject_species_form() (in module nwbinspector.checks._nwbfile_metadata) check_subject_weight() (in module nwbinspector.checks._nwbfile_metadata) check_sweeptable_deprecated() (in module nwbinspector.checks._icephys) check_table_time_columns_are_not_negative() (in module nwbinspector.checks._tables) check_table_values_for_dict() (in module nwbinspector.checks._tables) check_time_interval_time_columns() (in module nwbinspector.checks._tables) check_time_intervals_duration() (in module nwbinspector.checks._tables) check_time_intervals_start_time_not_constant() (in module nwbinspector.checks._tables) check_time_intervals_stop_after_start() (in module nwbinspector.checks._tables) check_time_series_data_is_not_empty() (in module nwbinspector.checks._time_series) check_time_series_duration() (in module nwbinspector.checks._time_series) check_timestamp_of_the_first_sample_is_not_negative() (in module nwbinspector.checks._time_series) check_timestamps_ascending() (in module nwbinspector.checks._time_series) check_timestamps_match_first_dimension() (in module nwbinspector.checks._time_series) check_timestamps_without_nans() (in module nwbinspector.checks._time_series) check_units_resolution_is_set() (in module nwbinspector.checks._ecephys) check_units_resolution_is_valid() (in module nwbinspector.checks._ecephys) check_units_table_duration() (in module nwbinspector.checks._ecephys) check_units_table_has_spikes() (in module nwbinspector.checks._ecephys)

I

Importance (class in nwbinspector._types) inspect_all() (in module nwbinspector._nwb_inspection) inspect_dandi_file_path() (in module nwbinspector._dandi_inspection) inspect_dandiset() (in module nwbinspector._dandi_inspection)

inspect_nwbfile() (in module nwbinspector._nwb_inspection) inspect_nwbfile_object() (in module nwbinspector._nwb_inspection) inspect_url() (in module nwbinspector._dandi_inspection) InspectorMessage (class in nwbinspector._types)

M

module nwbinspector._dandi_inspection nwbinspector._nwb_inspection nwbinspector._registration nwbinspector._types nwbinspector.checks._behavior nwbinspector.checks._ecephys nwbinspector.checks._general nwbinspector.checks._icephys nwbinspector.checks._image_series nwbinspector.checks._images nwbinspector.checks._nwb_containers nwbinspector.checks._nwbfile_metadata nwbinspector.checks._ogen nwbinspector.checks._ophys nwbinspector.checks._tables nwbinspector.checks._time_series

N

nwbinspector._dandi_inspection module nwbinspector._nwb_inspection module nwbinspector._registration module nwbinspector._types module nwbinspector.checks._behavior module nwbinspector.checks._ecephys module nwbinspector.checks._general module nwbinspector.checks._icephys module

nwbinspector.checks._image_series module nwbinspector.checks._images module nwbinspector.checks._nwb_containers module nwbinspector.checks._nwbfile_metadata module nwbinspector.checks._ogen module nwbinspector.checks._ophys module nwbinspector.checks._tables module nwbinspector.checks._time_series module

R

register_check() (in module nwbinspector._registration)

run_checks() (in module nwbinspector._nwb_inspection)

S

Severity (class in nwbinspector._types)